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Challenges Mid-Sized Firms Face in Claiming the R&D Tax Credit — And How to Overcome Them

The R&D Tax Credit is one of the most valuable incentives available to U.S. businesses, rewarding innovation and investment in new or improved products, processes, or technologies. Yet, many mid-sized firms miss out on this opportunity—not because they don’t qualify, but because they face unique challenges in identifying, documenting, and claiming the credit.

  1. Lack of Awareness and Misconceptions

Many mid-sized companies assume R&D credits are reserved for tech giants or startups. In reality, businesses across industries—manufacturing, engineering, software, food production and more—often qualify.

Solution: Educate internal teams about what qualifies as R&D.

  1. Limited Internal Resources

Unlike large corporations with dedicated tax departments, mid-sized firms often rely on lean finance teams. Tracking qualified research expenses (QREs) and maintaining proper documentation can be overwhelming.

Solution: Implement simple tracking systems and consider outsourcing to R&D tax credit specialists who can streamline the process.

  1. Documentation Challenges

The IRS requires detailed substantiation of R&D activities. Mid-sized firms may not have formal processes for documenting time spent, project details or technical uncertainties.

Solution: Start small—use project management tools to log activities and time. Encourage engineers and technical staff to maintain brief notes on project goals and challenges.

  1. Fear of Audit Risk

Some firms avoid claiming the credit due to concerns about triggering an IRS audit or not having “perfect” documentation.

Solution: Work with experienced advisors who understand IRS expectations and can help prepare defensible claims. The key is consistency and reasonable documentation—not perfection.

  1. Choosing the Right Calculation Method

Form 6765 offers two methods: the Regular Credit and the Alternative Simplified Credit (ASC). Mid-sized firms may struggle to determine which yields the best result.

Solution: Run both calculations annually and choose the optimal method. A tax advisor can help model scenarios and ensure compliance.

Next Steps

Mid-sized firms are engines of innovation—and they deserve to benefit from the R&D tax credit. By addressing these challenges proactively, companies can unlock significant financial value while fueling future growth.

If you’re a mid-sized business wondering whether your activities qualify, now is the time to explore your options. Please contact us for a free eligibility assessment and start maximizing your innovation investments.

 

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